GLM-related tools

From VoxBoWiki

Jump to: navigation, search
Tool Description
calcgs calculate the global signal for a 4D time series
calcps calculate the average power spectrum for a 4D time series
comptraces calculate the traces for a regression (used internally)
gds script processor for creating G matrices
gdw graphical interface for creating G matrices
glm graphical interface for setting up a GLM
glminfo utility to display information about a GLM directory
makematk make the K matrix (used internally)
makematkg make the KG matrix (used internally)
sumrfx display simple summaries of the contents of RFX volumes
vbdumpstats display selected voxel or region statistics for a GLM
vbfit fit a 1/f noise model to data
vbmakefilter utility to create exogenous filter and intrinsic noise model
vbmakeglm script processor for creating GLM analyses
vbmakeresid calculate redisuals from an existing GLM
vbmm2 voxbo matrix manipulation utility, mostly used internally for GLMs
vbpermgen graphical interface for setting up a permutation test with an existing GLM
vbperminfo tool to derive permutation distributions from existing sets of permutation volumes
vbpermmat internal tool to generate a matrix of randomly generated permutations
vbregress carries out regression with 4D or 1D data
vbse estimates spatial smoothness from a 4D volume using method of kiebel et al.
vbstatmap creates stat maps from GLM directories
vbtcalc graphical interface to generate critical thresholds from RFT or Bonferroni correction
vecregress use VoxBo's regression code with 1D vectors instead of a 4D series
Personal tools